STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadBUnannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (717 aa)    
Predicted Functional Partners:
fadA
Unannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
 0.999
CTZ23_03455
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 0.993
GCA_001922645_01301
Unannotated protein.
 0.990
pcaF
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 0.990
CTZ23_03485
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 0.989
CTZ23_06125
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 0.989
CTZ23_01775
Unannotated protein.
 
 0.939
CTZ23_02900
Unannotated protein.
  
 
 0.938
CTZ23_04935
Unannotated protein.
 
 0.932
CTZ23_03100
Unannotated protein.
 
 0.932
Your Current Organism:
Acinetobacter indicus
NCBI taxonomy Id: 756892
Other names: Acinetobacter guangdongensis, Acinetobacter guangdongensis Feng et al. 2014, Acinetobacter indicus Malhotra et al. 2012, Acinetobacter sp. 1NM-4, Acinetobacter sp. B18, Acinetobacter sp. CMG11-2, Acinetobacter sp. CMG27-3, Acinetobacter sp. CMG3-2, Acinetobacter sp. FS35-1, Acinetobacter sp. FS42-2, Acinetobacter sp. FS46-2, Acinetobacter sp. FS55-1, Acinetobacter sp. MM111-1, Acinetobacter sp. MM112-2, Acinetobacter sp. MM114-2, Acinetobacter sp. MMS32-1, Acinetobacter sp. MMS36-1-1, Acinetobacter sp. MMS9-2, CCM 7832, CCTCC AB 2014199 [[Acinetobacter guangdongensis]], CIP 110367, DSM 25388, GIMCC 1.656 [[Acinetobacter guangdongensis]], KCTC 42012 [[Acinetobacter guangdongensis]], strain 1NM-4 [[Acinetobacter guangdongensis]], strain A648
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