STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOL_s00043g111Uncharacterized protein. (751 aa)    
Predicted Functional Partners:
AOL_s00080g234
MPN domain-containing protein.
    
  0.471
AOL_s00083g140
Uncharacterized protein.
    
  0.448
AOL_s00007g406
Uncharacterized protein.
    
  0.444
AOL_s00078g81
Uncharacterized protein.
    
  0.432
AOL_s00081g300
MRG domain-containing protein.
    
  0.427
AOL_s00079g471
Uncharacterized protein.
    
  0.422
AOL_s00173g147
TPR_REGION domain-containing protein.
   
  0.421
AOL_s00076g399
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
  0.415
AOL_s00188g2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.414
Your Current Organism:
Arthrobotrys oligospora
NCBI taxonomy Id: 756982
Other names: A. oligospora ATCC 24927, Arthrobotrys oligospora ATCC 24927
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