STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOL_s00080g255Cog4 domain-containing protein. (844 aa)    
Predicted Functional Partners:
AOL_s00054g620
Uncharacterized protein.
    
 0.993
AOL_s00109g153
Uncharacterized protein.
   
 0.993
AOL_s00054g352
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.992
AOL_s00007g496
COG2 domain-containing protein.
   
 0.991
AOL_s00215g537
Uncharacterized protein.
    
 0.988
AOL_s00079g55
t-SNARE coiled-coil homology domain-containing protein.
    
 0.910
AOL_s00007g396
Vps54 domain-containing protein.
    
 0.870
AOL_s00043g596
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
     
 0.866
AOL_s00112g2
V-SNARE domain-containing protein.
     
 0.865
AOL_s00215g592
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.854
Your Current Organism:
Arthrobotrys oligospora
NCBI taxonomy Id: 756982
Other names: A. oligospora ATCC 24927, Arthrobotrys oligospora ATCC 24927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.