STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOL_s00109g180Reticulon-like protein. (260 aa)    
Predicted Functional Partners:
AOL_s00007g516
GTP_cyclohydroI domain-containing protein.
    
   0.883
AOL_s00043g713
Uncharacterized protein.
    
   0.883
AOL_s00043g629
Uncharacterized protein.
   
  
 0.825
AOL_s00215g612
Protein YOP1.
    
 
 0.815
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
 
 0.727
AOL_s00043g555
WD_REPEATS_REGION domain-containing protein.
    
  0.658
AOL_s00215g891
Uncharacterized protein.
   
 
 0.636
AOL_s00006g41
Uncharacterized protein.
     
 0.630
AOL_s00054g111
Uncharacterized protein.
    
 0.618
AOL_s00078g430
TPR_REGION domain-containing protein.
    
 0.618
Your Current Organism:
Arthrobotrys oligospora
NCBI taxonomy Id: 756982
Other names: A. oligospora ATCC 24927, Arthrobotrys oligospora ATCC 24927
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