STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106150365Short transient receptor potential channel 4-associated protein-like. (785 aa)    
Predicted Functional Partners:
LOC106164639
DNA damage-binding protein 1 isoform X1.
    
 
 0.705
LOC106152880
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
 
 
  
 0.609
LOC106174455
DDB1- and CUL4-associated factor 4-like.
   
  
 0.524
LOC106164568
DDB1- and CUL4-associated factor 5.
      
 0.510
LOC106170478
PHD finger protein 20-like protein 1 isoform X1.
      
 0.503
LOC106171869
DNA damage-binding protein 2 isoform X1.
     
 0.436
LOC106180270
cullin-4A; Belongs to the cullin family.
    
 
 0.432
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.