STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106150730Squalene synthase-like. (416 aa)    
Predicted Functional Partners:
LOC106169642
Squalene monooxygenase.
  
 
 0.998
LOC106175927
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.982
LOC106154330
Violaxanthin de-epoxidase, chloroplastic-like.
   
  
 0.980
LOC106178983
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
 
 
 0.979
LOC106150742
3-keto-steroid reductase.
   
 
 0.974
LOC106174186
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
  
 
 0.974
LOC106161627
Lathosterol oxidase; Belongs to the sterol desaturase family.
  
 
 0.972
LOC106164082
Lathosterol oxidase-like; Belongs to the sterol desaturase family.
  
 
 0.972
LOC106156766
Geranylgeranyl pyrophosphate synthase-like; Belongs to the FPP/GGPP synthase family.
  
 0.965
LOC106158460
Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
  
 0.951
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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