STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106152094IST1 homolog. (359 aa)    
Predicted Functional Partners:
LOC106159156
Charged multivesicular body protein 1b-2-like.
    
 
 0.961
LOC106181878
Vacuolar protein sorting-associated protein VTA1 homolog.
   
 
 0.950
LOC106175815
Charged multivesicular body protein 5.
    
 
 0.937
LOC106174846
Charged multivesicular body protein 2a.
    
 0.924
LOC106173059
Charged multivesicular body protein 3.
    
 0.920
LOC106159926
Charged multivesicular body protein 1a-like.
    
 
 0.906
LOC106173402
IST1 homolog isoform X1.
  
  
 
0.903
LOC106165538
Charged multivesicular body protein 6-B.
    
 0.887
LOC106151512
Charged multivesicular body protein 4b.
    
 0.881
LOC106151519
Charged multivesicular body protein 4b.
    
 0.881
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.