STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106152222Uncharacterized protein LOC106152222 isoform X1. (297 aa)    
Predicted Functional Partners:
LOC106176193
Protein PAT1 homolog 1.
    
 0.724
LOC106153709
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.706
LOC106174898
Peroxisomal targeting signal 1 receptor isoform X1.
     
 0.685
LOC106168392
5'-3' exoribonuclease 1.
   
 0.684
LOC106159801
mRNA-decapping enzyme 1B-like.
    
 0.681
LOC106176731
mRNA-decapping enzyme 1B.
    
 0.681
LOC106178138
Peroxisomal membrane protein PEX14 isoform X1.
     
 0.670
LOC106165616
Peroxisomal membrane protein PEX13.
     
 0.667
LOC106150982
Peroxisomal NADH pyrophosphatase NUDT12.
   
 
 0.662
LOC106156782
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 0.639
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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