LOC106151724 protein (Lingula anatina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106151724

NAD-dependent protein deacetylase sirtuin-6-like. (405 aa)

Predicted Functional Partners:

LOC106168766

0.922

LOC106150982

0.910

LOC106172527

0.908

LOC106177084

0.908

LOC106169236

0.900

LOC106160343

0.728

LOC106177274

0.728

LOC106153402

0.690

LOC106151221

0.650

LOC106152759

0.650

Your Current Organism:

Lingula anatina

NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106150982	LOC106151221	A0A1S3H0F9	A0A1S3H3T9	Peroxisomal NADH pyrophosphatase NUDT12.	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	0.931
LOC106150982	LOC106151724	A0A1S3H0F9	A0A1S3H608	Peroxisomal NADH pyrophosphatase NUDT12.	NAD-dependent protein deacetylase sirtuin-6-like.	0.910
LOC106150982	LOC106153402	A0A1S3H0F9	A0A1S3HBB7	Peroxisomal NADH pyrophosphatase NUDT12.	NAD kinase.	0.909
LOC106150982	LOC106160343	A0A1S3H0F9	A0A1S3I3G2	Peroxisomal NADH pyrophosphatase NUDT12.	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	0.987
LOC106150982	LOC106168766	A0A1S3H0F9	A0A1S3IZG4	Peroxisomal NADH pyrophosphatase NUDT12.	Nicotinamide-nucleotide adenylyltransferase.	0.936
LOC106150982	LOC106169236	A0A1S3H0F9	A0A1S3J2L3	Peroxisomal NADH pyrophosphatase NUDT12.	NAD(P) transhydrogenase, mitochondrial.	0.902
LOC106150982	LOC106177084	A0A1S3H0F9	A0A1S3JY31	Peroxisomal NADH pyrophosphatase NUDT12.	Nicotinamide phosphoribosyltransferase.	0.901
LOC106150982	LOC106177274	A0A1S3H0F9	A0A1S3JZK0	Peroxisomal NADH pyrophosphatase NUDT12.	Glutamine-dependent NAD(+) synthetase isoform X1.	0.987
LOC106151221	LOC106150982	A0A1S3H3T9	A0A1S3H0F9	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	Peroxisomal NADH pyrophosphatase NUDT12.	0.931
LOC106151221	LOC106151724	A0A1S3H3T9	A0A1S3H608	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	NAD-dependent protein deacetylase sirtuin-6-like.	0.650
LOC106151221	LOC106153402	A0A1S3H3T9	A0A1S3HBB7	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	NAD kinase.	0.961
LOC106151221	LOC106160343	A0A1S3H3T9	A0A1S3I3G2	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	0.928
LOC106151221	LOC106168766	A0A1S3H3T9	A0A1S3IZG4	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	Nicotinamide-nucleotide adenylyltransferase.	0.961
LOC106151221	LOC106169236	A0A1S3H3T9	A0A1S3J2L3	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	NAD(P) transhydrogenase, mitochondrial.	0.920
LOC106151221	LOC106177274	A0A1S3H3T9	A0A1S3JZK0	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	Glutamine-dependent NAD(+) synthetase isoform X1.	0.928
LOC106151724	LOC106150982	A0A1S3H608	A0A1S3H0F9	NAD-dependent protein deacetylase sirtuin-6-like.	Peroxisomal NADH pyrophosphatase NUDT12.	0.910
LOC106151724	LOC106151221	A0A1S3H608	A0A1S3H3T9	NAD-dependent protein deacetylase sirtuin-6-like.	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	0.650
LOC106151724	LOC106152759	A0A1S3H608	A0A1S3H736	NAD-dependent protein deacetylase sirtuin-6-like.	Indolethylamine N-methyltransferase-like.	0.650
LOC106151724	LOC106153402	A0A1S3H608	A0A1S3HBB7	NAD-dependent protein deacetylase sirtuin-6-like.	NAD kinase.	0.690
LOC106151724	LOC106160343	A0A1S3H608	A0A1S3I3G2	NAD-dependent protein deacetylase sirtuin-6-like.	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	0.728