STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106153002Intron-binding protein aquarius-like isoform X1. (1483 aa)    
Predicted Functional Partners:
LOC106180750
pre-mRNA-splicing factor SYF1.
   
 0.985
LOC106152565
pre-mRNA-processing factor 19.
    
 0.984
LOC106158845
Crooked neck-like protein 1 isoform X2.
    
 0.983
LOC106163021
Protein BUD31 homolog.
    
  0.968
LOC106180025
116 kDa U5 small nuclear ribonucleoprotein component-like isoform X1.
   
 
 0.954
LOC106178645
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.935
LOC106151563
U2 small nuclear ribonucleoprotein A.
    
 
 0.926
LOC106156312
pre-mRNA-splicing factor RBM22-like.
    
 0.923
LOC106172314
pre-mRNA-splicing factor RBM22.
    
 0.923
LOC106169811
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
    
 0.915
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.