STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106153342Trafficking protein particle complex subunit 8-like isoform X1. (1494 aa)    
Predicted Functional Partners:
LOC106172401
Trafficking protein particle complex subunit 6B.
   
 0.968
LOC106151496
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.967
LOC106151993
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.967
LOC106153734
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.967
LOC106164189
Trafficking protein particle complex subunit 2.
    
 0.967
LOC106173145
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.967
LOC106160658
Ras-related protein ORAB-1.
    
 0.943
LOC106153153
Trafficking protein particle complex subunit 2-like protein.
    
 0.930
LOC106168658
Lebercilin isoform X1.
    
 0.882
LOC106150681
Trafficking protein particle complex subunit 11-like.
   
 0.874
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.