STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106154149Growth hormone-inducible transmembrane protein-like; Belongs to the BI1 family. (136 aa)    
Predicted Functional Partners:
LOC106155696
Probable Bax inhibitor 1; Belongs to the BI1 family.
   
  
0.619
LOC106161039
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 
 0.579
LOC106156071
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
      
 0.506
LOC106161892
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
      
 0.499
LOC106174466
Tetraspanin.
      
 0.485
LOC106169955
Nuclear receptor subfamily 4 group A member 2-like.
      
 0.461
LOC106155608
Vesicle transport through interaction with t-SNAREs homolog 1A.
      
 0.432
LOC106152987
Integral membrane protein 2C.
      
 0.428
LOC106179462
Integral membrane protein 2B-like.
      
 0.428
LOC106163569
Tetraspanin.
      
 0.400
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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