STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106154205Chordin. (908 aa)    
Predicted Functional Partners:
LOC106163298
Bone morphogenetic protein 4.
    
 0.985
LOC106155281
Bone morphogenetic protein 7 isoform X1.
    
 0.969
LOC106155400
Metalloendopeptidase.
   
 
 0.939
LOC106161047
Bone morphogenetic protein 7.
   
 0.934
LOC106155121
Sulfite oxidase.
      
 0.658
LOC106152967
Twisted gastrulation protein homolog 1-A.
    
 
 0.656
LOC106158029
Twisted gastrulation protein homolog 1-A-like.
    
 
 0.656
LOC106150694
Homeobox protein OTX2-B.
    
 
 0.641
LOC106179662
Mothers against decapentaplegic homolog.
   
 
 0.641
LOC106150970
follistatin-A isoform X1.
      
 0.638
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.