STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106154582E3 ubiquitin-protein ligase MARCH6. (719 aa)    
Predicted Functional Partners:
LOC106175523
E3 ubiquitin-protein ligase MARCH6.
  
  
 
0.900
LOC106173913
FK506-binding protein.
    
 
 0.815
LOC106174552
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.788
LOC106152592
CCR4-NOT transcription complex subunit 2 isoform X1.
    
 
 0.728
LOC106158915
CCR4-NOT transcription complex subunit 2-like.
    
 
 0.728
LOC106150884
E3 ubiquitin-protein ligase AMFR.
    
 
 0.708
LOC106166555
E3 ubiquitin-protein ligase synoviolin A.
    
 
 0.708
LOC106154641
Spermatogenesis-associated protein 5-like.
    
 
 0.612
LOC106165034
Transitional endoplasmic reticulum ATPase isoform X2; Belongs to the AAA ATPase family.
    
 
 0.612
LOC106171746
Spermatogenesis-associated protein 5-like protein 1.
    
 
 0.612
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.