STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106155133Protein Shroom2-like. (946 aa)    
Predicted Functional Partners:
LOC106178264
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.726
LOC106164058
Actin-like protein 6B; Belongs to the actin family.
   
 0.675
LOC106170551
RuvB-like helicase; Belongs to the RuvB family.
    
 0.663
LOC106177035
Histone H2A; Belongs to the histone H2A family.
   
 0.646
LOC106176475
General transcription factor IIH subunit 1.
    
 0.635
LOC106175870
General transcription factor IIH subunit 3.
    
 0.623
LOC106166455
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 0.596
LOC106157678
DNA-directed RNA polymerase I subunit RPA49 isoform X1.
    
 0.577
LOC106157072
Actin-related protein 5; Belongs to the actin family.
    
 0.551
LOC106181758
Actin-related protein 5-like; Belongs to the actin family.
    
 0.551
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.