STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1061556455' exonuclease Apollo isoform X1. (956 aa)    
Predicted Functional Partners:
LOC106173820
Cleavage and polyadenylation specificity factor subunit 1-like.
   
 0.822
LOC106181495
Symplekin.
   
 0.803
LOC106165838
pre-mRNA 3'-end-processing factor FIP1 isoform X1.
    
 0.769
LOC106151014
Fanconi anemia group M protein.
   
 0.753
LOC106167180
poly(A) polymerase type 3.
    
 0.744
LOC106180496
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.
   
 0.743
LOC106169440
Cleavage stimulation factor subunit 1.
   
 0.733
LOC106177723
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.708
LOC106178168
Cleavage stimulation factor subunit 3 isoform X1.
   
 0.701
LOC106174259
Integrator complex subunit 1.
    
 0.699
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.