STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106155659Putative defense protein 3. (183 aa)    
Predicted Functional Partners:
LOC106152314
Probable 39S ribosomal protein L23, mitochondrial.
   
 
 0.604
LOC106175715
39S ribosomal protein L3, mitochondrial.
   
   0.582
LOC106179113
Uncharacterized protein LOC106179113.
   
 
 0.562
LOC106153201
39S ribosomal protein L19, mitochondrial isoform X1.
   
 
 0.544
LOC106153964
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.540
LOC106154615
Uncharacterized protein LOC106154615.
   
 
 0.538
LOC106167237
28S ribosomal protein S15, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS15 family.
   
   0.534
LOC106168492
39S ribosomal protein L13, mitochondrial.
   
 
 0.533
LOC106178015
39S ribosomal protein L4, mitochondrial.
   
 
 0.533
LOC106174918
39S ribosomal protein L47, mitochondrial.
   
 
 0.530
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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