STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106155795Major facilitator superfamily domain-containing protein 8 isoform X4. (647 aa)    
Predicted Functional Partners:
LOC106150521
Ceroid-lipofuscinosis neuronal protein 5.
      
 0.526
LOC106152315
Protein ABHD18.
      
 0.503
LOC106158037
LOW QUALITY PROTEIN: major facilitator superfamily domain-containing protein 6-like.
      
 0.497
LOC106167413
Solute carrier family 49 member A3.
      
 0.495
LOC106175696
Protein spinster homolog 1 isoform X1.
      
 0.437
LOC106178704
Protein CLN8.
      
 0.418
LOC106178713
Protein CLN8-like.
      
 0.418
LOC106156240
Palmitoyl-protein thioesterase 1.
      
 0.407
LOC106178540
Palmitoyl-protein thioesterase 1-like.
      
 0.407
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.