STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106155891NACHT and WD repeat domain-containing protein 2 isoform X1. (1807 aa)    
Predicted Functional Partners:
LOC106166403
Transcription initiation factor TFIID subunit 12 isoform X1.
   
 0.550
LOC106181657
Transcription initiation factor TFIID subunit 9B.
    
 0.545
LOC106154948
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.542
LOC106173994
Transcription initiation factor TFIID subunit 4-like isoform X1.
   
 0.538
LOC106173820
Cleavage and polyadenylation specificity factor subunit 1-like.
   
 0.535
LOC106165350
Testis-expressed protein 10 homolog isoform X1.
   
 0.533
LOC106174427
Cell division cycle protein 16 homolog.
   
 0.523
LOC106160774
Transcription initiation factor TFIID subunit 8.
    
 0.504
LOC106170853
E3 SUMO-protein ligase RanBP2.
   
 0.495
LOC106177627
RANBP2-like and GRIP domain-containing protein 5/6.
   
 0.495
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.