STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106156025WD repeat-containing protein 25. (566 aa)    
Predicted Functional Partners:
LOC106180873
pre-mRNA-splicing factor SLU7.
   
 0.902
LOC106170224
pre-mRNA-splicing factor SYF2.
    
 0.894
LOC106155019
pre-mRNA-splicing factor CWC22 homolog.
   
 0.878
LOC106171092
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
   
 0.868
LOC106172769
Serine/arginine repetitive matrix protein 2 isoform X1.
   
 0.867
LOC106179977
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1.
   
 0.850
LOC106178645
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.845
LOC106170422
Coiled-coil domain-containing protein 12.
    
  0.832
LOC106161153
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like.
   
 0.825
LOC106160881
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.825
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.