STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106155624Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (288 aa)    
Predicted Functional Partners:
LOC106150763
RING-box protein 1.
    
 0.974
LOC106163766
NEDD8-conjugating enzyme UBE2F-like; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.926
LOC106168757
NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.926
LOC106180953
NEDD8.
    
 0.924
LOC106170279
Cullin-1; Belongs to the cullin family.
   
 0.898
LOC106180312
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
   
 0.890
LOC106171394
cullin-3-A; Belongs to the cullin family.
   
 0.862
LOC106180032
cullin-3-B-like; Belongs to the cullin family.
   
 0.862
LOC106150436
COP9 signalosome complex subunit 5.
    
 0.831
LOC106151911
Cullin-2; Belongs to the cullin family.
   
 0.827
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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