STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106156551TATA-binding protein-associated factor 172-like. (85 aa)    
Predicted Functional Partners:
LOC106182107
TATA-box-binding protein.
    
 
 0.916
LOC106151417
Protein Dr1-like.
    
 
 0.722
LOC106155658
Dr1-associated corepressor.
    
 
 0.678
LOC106158143
Dr1-associated corepressor-like.
    
 
 0.678
LOC106151628
Uncharacterized protein LOC106151628.
    
 
 0.591
LOC106157476
TATA box-binding protein-like protein 1.
    
 
 0.591
LOC106157482
TATA box-binding protein-like protein 1 isoform X1.
    
 
 0.591
LOC106172655
Uncharacterized protein LOC106172655.
    
 
 0.591
LOC106176195
Transcription initiation protein SPT3 homolog.
    
 
 0.528
LOC106151591
PHD finger protein 12 isoform X1.
   
 
 0.485
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.