STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106156639Syntaxin-binding protein 4. (706 aa)    
Predicted Functional Partners:
LOC106158115
Intraflagellar transport protein 57 homolog.
    
 0.574
LOC106164727
Intraflagellar transport protein 172 homolog.
    
 0.568
LOC106157931
Partitioning defective 6 homolog beta-like.
    
 0.553
LOC106163513
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
    
 0.541
LOC106171880
Peripheral plasma membrane protein CASK-like.
    
 0.541
LOC106172900
Peripheral plasma membrane protein CASK-like.
    
 0.541
LOC106155084
Intraflagellar transport protein 88 homolog isoform X1.
    
 0.540
LOC106169064
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 
 0.509
LOC106152146
Clusterin-associated protein 1.
    
 0.493
LOC106169653
Intraflagellar transport protein 52 homolog.
    
 0.487
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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