STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106156060Protein ZGRF1-like. (925 aa)    
Predicted Functional Partners:
LOC106180265
Regulator of nonsense transcripts 3A.
    
 0.920
LOC106154323
Regulator of nonsense transcripts 2.
   
 0.908
LOC106158056
Protein SMG5.
   
 0.851
LOC106153649
Telomerase-binding protein EST1A.
   
 0.849
LOC106168552
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.807
LOC106152195
Protein CASC3 isoform X1.
    
 0.799
LOC106178811
Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family.
    
 
 0.782
LOC106167114
Nuclear cap-binding protein subunit 2.
   
 0.780
LOC106171418
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.773
LOC106155723
Uncharacterized protein LOC106155723.
    
 0.735
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.