STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106156434Zinc finger protein Noc. (503 aa)    
Predicted Functional Partners:
LOC106163162
LOW QUALITY PROTEIN: sal-like protein 1.
   
  
 0.524
LOC106156430
erlin-2-B.
      
 0.504
LOC106154988
Small G protein signaling modulator 3 isoform X2.
      
 0.503
LOC106159323
CCAAT/enhancer-binding protein gamma isoform X1.
      
 0.502
LOC106151120
Nucleolar complex protein 4 homolog.
      
 0.499
LOC106166398
Transmembrane protein 9 isoform X1.
      
 0.485
LOC106165709
S phase cyclin A-associated protein in the endoplasmic reticulum-like isoform X1.
      
 0.485
LOC106174030
Uncharacterized protein LOC106174030.
   
  
 0.451
LOC106158072
Transducin-like enhancer protein 4 isoform X2.
    
 
 0.411
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.