STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106157195Rho guanine nucleotide exchange factor 7-like isoform X1. (636 aa)    
Predicted Functional Partners:
LOC106178098
ARF GTPase-activating protein GIT2 isoform X1.
    
 0.969
LOC106176107
Uncharacterized protein LOC106176107.
     
0.927
LOC106154095
Beta-parvin-like.
   
 0.827
LOC106177307
E3 ubiquitin-protein ligase CBL-B.
    
 0.794
LOC106153444
Non-specific serine/threonine protein kinase.
    
 0.790
LOC106154033
Non-specific serine/threonine protein kinase.
    
 0.790
LOC106172042
Serine/threonine-protein kinase PAK 3.
    
 0.790
LOC106177797
Calcium-dependent protein kinase 2-like isoform X1.
    
 0.790
LOC106180240
Cytoplasmic protein NCK2.
    
0.768
LOC106174454
Non-specific serine/threonine protein kinase.
    
 0.755
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.