STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106156811Syntaxin-5-like; Belongs to the syntaxin family. (367 aa)    
Predicted Functional Partners:
LOC106165635
BET1-like protein.
   
 0.999
LOC106170469
Golgi SNAP receptor complex member 2-like; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.999
LOC106171275
BET1 homolog.
   
 0.999
LOC106153596
Synaptobrevin homolog YKT6-like; Belongs to the synaptobrevin family.
    
 0.998
LOC106162100
Golgi SNAP receptor complex member 1 isoform X1.
    
 0.998
LOC106154620
Vesicle-trafficking protein SEC22b-like isoform X1; Belongs to the synaptobrevin family.
   
 0.997
LOC106163317
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.997
LOC106165534
General vesicular transport factor p115-like.
    
 0.995
LOC106155608
Vesicle transport through interaction with t-SNAREs homolog 1A.
    
 
 0.992
LOC106180781
Vesicle-associated membrane protein 4.
    
 0.992
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.