STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106157717Suppressor of cytokine signaling 5. (535 aa)    
Predicted Functional Partners:
LOC106165645
elongin-C; Belongs to the SKP1 family.
    
 0.981
LOC106181977
elongin-B.
    
 0.964
LOC106168837
Cullin-5-like; Belongs to the cullin family.
   
 0.876
LOC106168804
Cullin-5-like; Belongs to the cullin family.
   
 0.876
LOC106165712
Tyrosine-protein kinase JAK2.
    
 0.840
LOC106161231
SPRY domain-containing SOCS box protein 1.
     
 0.749
LOC106177519
Signal transducer and activator of transcription 3.
   
 0.746
LOC106175814
Signal transducer and activator of transcription.
   
 0.746
LOC106180953
NEDD8.
    
 0.741
LOC106167662
LOW QUALITY PROTEIN: cullin-associated NEDD8-dissociated protein 1-like.
    
 0.736
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.