STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106157831Nuclear transport factor 2. (150 aa)    
Predicted Functional Partners:
LOC106151014
Fanconi anemia group M protein.
    
 0.990
LOC106172199
DNA ligase 1-like.
    
 
 0.922
LOC106150913
Uncharacterized protein LOC106150913.
   
 0.912
LOC106171898
E3 ubiquitin-protein ligase FANCL.
    
 0.889
LOC106170524
Fanconi anemia group F protein-like.
    
 0.888
LOC106168718
Uncharacterized protein LOC106168718.
   
 0.873
LOC106160330
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.864
LOC106172374
Nuclear protein localization protein 4 homolog.
    
 0.834
LOC106162055
Fanconi anemia group D2 protein.
   
 0.822
LOC106170533
Uncharacterized protein LOC106170533.
    
 0.790
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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