STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106157593Chromatin target of PRMT1 protein isoform X1. (306 aa)    
Predicted Functional Partners:
LOC106176065
Spliceosome RNA helicase DDX39B.
   
 0.929
LOC106169302
SAP domain-containing ribonucleoprotein.
   
 0.926
LOC106159727
THO complex subunit 4.
   
 0.908
LOC106155666
Polymerase delta-interacting protein 3 isoform X1.
   
 0.882
LOC106176718
THO complex subunit 7 homolog.
    
 0.793
LOC106176473
Zinc finger CCCH domain-containing protein 11A isoform X1.
    
 0.783
LOC106157121
THO complex subunit 5 homolog.
   
 0.740
LOC106156927
THO complex subunit 5 homolog A-like isoform X1.
   
 0.740
LOC106180496
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.
     
 0.728
LOC106151846
THO complex subunit 6 homolog.
     
 0.719
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.