STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106158277Pleckstrin homology domain-containing family A member 8 isoform X1. (320 aa)    
Predicted Functional Partners:
LOC106165450
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
      
 0.491
LOC106153415
ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family.
   
 0.423
LOC106155199
ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.423
LOC106156098
Uncharacterized protein LOC106156098.
   
 0.423
LOC106159377
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.423
LOC106180967
Uncharacterized protein LOC106180967.
   
 0.423
LOC106180966
Probable ADP-ribosylation factor At2g15310.
   
 0.423
LOC106181359
ADP-ribosylation factor-like protein 5B isoform X1; Belongs to the small GTPase superfamily. Arf family.
   
 0.423
LOC106170187
Glycolipid transfer protein.
  
   
0.406
LOC106161787
ADP-ribosylation factor-like; Belongs to the small GTPase superfamily. Arf family.
   
 0.401
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.