STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106158380Protein phosphatase 1 regulatory subunit 42-like. (133 aa)    
Predicted Functional Partners:
LOC106157436
COP9 signalosome complex subunit 4.
   
 0.972
LOC106161243
COP9 signalosome complex subunit 6-like isoform X1.
   
 0.968
LOC106152650
COP9 signalosome complex subunit 8.
   
 0.964
LOC106172382
COP9 signalosome complex subunit 1.
   
 0.963
LOC106181198
COP9 signalosome complex subunit 3.
   
 0.963
LOC106180953
NEDD8.
   
 0.922
LOC106152466
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.917
LOC106180270
cullin-4A; Belongs to the cullin family.
    
 0.893
LOC106160618
COP9 signalosome complex subunit 2-like.
   
 0.870
LOC106160640
COP9 signalosome complex subunit 2.
   
 0.870
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.