STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106159120Nucleolar protein 56-like. (550 aa)    
Predicted Functional Partners:
LOC106166889
Nucleolar protein 58.
  
0.999
LOC106156251
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.998
LOC106172608
rRNA 2'-O-methyltransferase fibrillarin-like.
   
 0.998
LOC106176533
U3 small nucleolar RNA-associated protein 15 homolog.
   
 0.996
LOC106179172
H/ACA ribonucleoprotein complex subunit 4 isoform X1.
   
 
 0.995
LOC106167965
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
   
 0.991
LOC106175192
Ribosome biogenesis protein BMS1 homolog isoform X1.
   
 
 0.989
LOC106173778
Nucleolar protein 6.
   
 0.988
LOC106169057
LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 14 homolog A-like.
   
 0.986
LOC106159095
rRNA-processing protein FCF1 homolog.
   
 0.981
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.