STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106158559Nucleoprotein TPR. (2472 aa)    
Predicted Functional Partners:
LOC106172199
DNA ligase 1-like.
   
 0.997
LOC106170853
E3 SUMO-protein ligase RanBP2.
   
 0.962
LOC106177627
RANBP2-like and GRIP domain-containing protein 5/6.
   
 0.962
LOC106162899
Nuclear pore complex protein Nup98-Nup96.
   
 0.940
LOC106181491
Nuclear pore complex protein Nup133.
   
 0.935
LOC106154690
Nuclear pore complex protein Nup205.
   
 0.933
LOC106160528
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.932
LOC106169786
Nuclear RNA export factor 1-like.
   
 0.932
LOC106173947
Nuclear RNA export factor 1.
   
 0.932
LOC106180839
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.932
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.