STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106160354Voltage-gated potassium channel subunit beta-2. (379 aa)    
Predicted Functional Partners:
LOC106168818
Potassium voltage-gated channel subfamily A member 2 isoform X1; Belongs to the potassium channel family.
   
 0.939
LOC106176953
Potassium voltage-gated channel subfamily H member 1.
    
 0.794
LOC106152918
Potassium voltage-gated channel protein Shal isoform X2; Belongs to the potassium channel family.
    
 0.703
LOC106161295
Potassium voltage-gated channel subfamily H member 8.
    
 0.641
LOC106169460
Potassium voltage-gated channel subfamily H member 8-like.
    
 0.641
LOC106181491
Nuclear pore complex protein Nup133.
   
 0.624
LOC106172029
Potassium voltage-gated channel subfamily A member 7; Belongs to the potassium channel family.
   
 0.568
LOC106172027
Potassium voltage-gated channel protein Shaker; Belongs to the potassium channel family.
   
 0.568
LOC106167612
G protein-activated inward rectifier potassium channel 3-like.
      
 0.504
LOC106160528
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.492
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.