STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106160842G patch domain-containing protein 4. (324 aa)    
Predicted Functional Partners:
LOC106179977
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1.
   
 
 0.945
LOC106179586
Bystin.
   
   0.927
LOC106157688
Nucleolar MIF4G domain-containing protein 1.
   
   0.914
LOC106172608
rRNA 2'-O-methyltransferase fibrillarin-like.
   
   0.909
LOC106169811
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 
 0.908
LOC106180505
Surfeit locus protein 6 homolog.
   
 
 0.793
LOC106161918
WD repeat-containing protein 46-like isoform X3.
   
   0.752
LOC106161921
WD repeat-containing protein 46-like.
   
   0.752
LOC106178515
WD repeat-containing protein 46.
   
   0.752
LOC106170563
Cell growth-regulating nucleolar protein.
   
   0.710
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.