STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106162103Nuclear factor NF-kappa-B p100 subunit-like. (429 aa)    
Predicted Functional Partners:
LOC106159824
Putative transcription factor p65 homolog.
   
 0.838
LOC106168887
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 0.723
LOC106170753
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.723
LOC106181029
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.620
LOC106170279
Cullin-1; Belongs to the cullin family.
   
 0.594
LOC106152458
ubiquitin-40S ribosomal protein S27a.
    
  0.591
LOC106159735
SUMO-conjugating enzyme UBC9-B isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.572
LOC106175037
Myosin-3-like.
    
 0.570
LOC106150763
RING-box protein 1.
   
 0.526
LOC106177828
Myeloid differentiation primary response protein MyD88-like.
   
 0.522
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.