STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106162396Vinculin. (1030 aa)    
Predicted Functional Partners:
LOC106154931
Leupaxin isoform X1.
   
 0.931
LOC106155859
Talin-1 isoform X1.
   
 0.839
LOC106170814
Talin rod domain-containing protein 1-like.
   
 0.839
LOC106163355
Talin-1-like.
   
 0.839
LOC106150949
Ribonucleoprotein PTB-binding 1-like.
    
 
 0.831
LOC106156043
Alpha-actinin isoform X1.
   
 
 0.796
LOC106177644
Uncharacterized protein LOC106177644 isoform X1.
   
 0.784
LOC106178234
Uncharacterized protein LOC106178234 isoform X1.
   
 0.784
LOC106151299
Myosin-2 essential light chain-like.
    
 0.718
LOC106151310
Catenin beta isoform X2.
   
 0.702
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.