STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106163620Sister chromatid cohesion protein DCC1 isoform X1. (418 aa)    
Predicted Functional Partners:
LOC106162722
Chromosome transmission fidelity protein 18 homolog.
   
 0.989
LOC106180511
Replication factor C subunit 3.
   
 0.989
LOC106162664
Chromosome transmission fidelity protein 18 homolog.
   
 0.989
LOC106159143
Replication factor C subunit 2.
   
 0.966
LOC106177191
Replication factor C subunit 4.
   
 0.962
LOC106170217
Replication factor C subunit 5.
   
 0.960
LOC106165766
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.939
LOC106166515
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.939
LOC106155693
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.902
LOC106178697
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.869
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.