STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106164559Peflin-like. (259 aa)    
Predicted Functional Partners:
LOC106154800
Protein transport protein Sec31A-like.
    
 
 0.716
LOC106152012
Programmed cell death 6-interacting protein isoform X1.
    
 
 0.562
LOC106166561
Programmed cell death 6-interacting protein.
    
 
 0.562
LOC106152703
Ankyrin repeat domain-containing protein 40.
    
 
 0.460
LOC106171010
Heme-binding protein 2.
    
 
 0.450
LOC106171074
Heme-binding protein 2.
    
 
 0.450
LOC106171120
Heme-binding protein 2.
    
 
 0.450
LOC106162917
Calpain small subunit 1-like.
  
0.438
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.