STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106164717Syntenin-1. (304 aa)    
Predicted Functional Partners:
LOC106152012
Programmed cell death 6-interacting protein isoform X1.
    
 0.820
LOC106166561
Programmed cell death 6-interacting protein.
    
 0.820
LOC106167859
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 
 0.693
LOC106160771
Ephrin-4 isoform X1; Belongs to the ephrin family.
    
 0.684
LOC106169952
Tetraspanin.
   
 0.655
LOC106151852
Tetraspanin.
    
 0.637
LOC106158115
Intraflagellar transport protein 57 homolog.
    
 0.574
LOC106164727
Intraflagellar transport protein 172 homolog.
    
 0.568
LOC106163513
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
   
 0.567
LOC106171880
Peripheral plasma membrane protein CASK-like.
   
 0.567
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.