STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106164893Interleukin enhancer-binding factor 2. (420 aa)    
Predicted Functional Partners:
LOC106158989
Uncharacterized protein LOC106158989 isoform X1.
   
 
 0.686
LOC106169375
Zinc finger RNA-binding protein.
   
 
0.686
LOC112042372
Zinc finger RNA-binding protein-like.
   
 
 0.686
LOC106164370
Small nuclear ribonucleoprotein Sm D2.
   
   0.643
LOC106159727
THO complex subunit 4.
   
  
 0.635
LOC106162565
Small nuclear ribonucleoprotein F.
   
   0.613
LOC106159635
TAR DNA-binding protein 43.
   
 
 0.596
LOC106151609
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
    0.565
LOC106152167
Lupus La protein homolog.
   
  
 0.547
LOC106172608
rRNA 2'-O-methyltransferase fibrillarin-like.
   
  
 0.523
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.