STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106165190Histidine protein methyltransferase 1 homolog. (141 aa)    
Predicted Functional Partners:
LOC106154172
Protein-lysine N-methyltransferase LOC106154172; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
   
  
 0.658
LOC106180673
60S ribosomal protein L3-like; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.537
LOC106152887
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.521
LOC106152345
DNA/RNA-binding protein KIN17.
      
 0.513
LOC106158635
Electron transfer flavoprotein beta subunit lysine methyltransferase-like.
   
  
 0.511
LOC106166378
SET domain-containing protein 4 isoform X1.
   
  
 0.510
LOC106167360
Protein FAM173B.
   
  
 0.510
LOC106177379
Methyltransferase-like protein 22.
      
 0.506
LOC106155691
Calmodulin-lysine N-methyltransferase isoform X1.
      
 0.499
LOC106154545
Methyltransferase-like protein 23 isoform X1.
   
  
 0.496
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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