STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106165444L-galactose dehydrogenase isoform X1. (357 aa)    
Predicted Functional Partners:
LOC106161229
Spermidine synthase.
 
    
 0.731
LOC106169828
GDP-D-glucose phosphorylase 1.
      
 0.633
LOC106181491
Nuclear pore complex protein Nup133.
   
 0.611
LOC106152378
Inositol-1-monophosphatase.
   
  
 0.516
LOC106153804
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
      
 0.512
LOC106181182
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
      
 0.512
LOC106172041
Protein SEC13 homolog; Belongs to the WD repeat SEC13 family.
    
 0.474
LOC106172942
Protein SEC13 homolog; Belongs to the WD repeat SEC13 family.
    
 0.474
LOC106176953
Potassium voltage-gated channel subfamily H member 1.
    
 0.474
LOC106160528
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.465
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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