STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106165689Transcription elongation regulator 1 isoform X1. (1039 aa)    
Predicted Functional Partners:
LOC106178485
Microfibrillar-associated protein 1.
   
 0.997
LOC106181042
pre-mRNA-splicing factor 38A isoform X1.
   
 0.995
LOC106150631
Zinc finger matrin-type protein 2.
    
  0.992
LOC106151032
Splicing factor 3B subunit 4 isoform X1.
    
 
 0.984
LOC106151563
U2 small nuclear ribonucleoprotein A.
   
 
 0.982
LOC106176064
Splicing factor 3B subunit 1.
   
 
 0.982
LOC106161465
Splicing factor 3A subunit 1-like.
   
   0.981
LOC106155817
Splicing factor 3A subunit 3.
   
   0.980
LOC106160596
Spliceosome-associated protein CWC15 homolog.
   
  0.980
LOC106150516
Pleiotropic regulator 1-like.
    
  0.979
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.