STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106166982Uncharacterized protein LOC106166982. (877 aa)    
Predicted Functional Partners:
LOC106152466
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.842
LOC106166864
Uncharacterized protein LOC106166864.
 
     0.648
LOC106176107
Uncharacterized protein LOC106176107.
     
 0.640
CYTB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
   
 
 0.627
LOC106161935
60S ribosomal protein L21-like.
   
 
 0.577
LOC106178325
39S ribosomal protein L2, mitochondrial.
   
 
 0.571
LOC106165549
60S ribosomal protein L13a isoform X1; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.550
LOC106170082
60S ribosomal protein L8 isoform X1.
   
 
 0.547
LOC106165031
BRISC and BRCA1-A complex member 1.
    
 0.545
LOC106154792
BRCA1-associated RING domain protein 1-like.
    
 0.524
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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