STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106167110Protein OS-9. (740 aa)    
Predicted Functional Partners:
LOC106155209
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.958
LOC106176103
Trichohyalin isoform X1.
   
 0.893
LOC106180419
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.829
LOC106181715
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.829
LOC106150884
E3 ubiquitin-protein ligase AMFR.
   
 0.821
LOC106166555
E3 ubiquitin-protein ligase synoviolin A.
   
 0.821
LOC106162403
Uncharacterized protein LOC106162403.
   
 0.788
LOC106161986
Protein sel-1 homolog 3.
   
 0.788
LOC106154641
Spermatogenesis-associated protein 5-like.
    
 0.703
LOC106165034
Transitional endoplasmic reticulum ATPase isoform X2; Belongs to the AAA ATPase family.
    
 0.703
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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