STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106168155F-box/LRR-repeat protein 7-like. (148 aa)    
Predicted Functional Partners:
LOC106181029
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.816
LOC106170279
Cullin-1; Belongs to the cullin family.
    
 0.714
LOC106180953
NEDD8.
    
 0.547
LOC106167662
LOW QUALITY PROTEIN: cullin-associated NEDD8-dissociated protein 1-like.
     
 0.537
LOC106150763
RING-box protein 1.
     
 0.525
LOC106165859
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 
 0.514
LOC106162675
Protein prenyltransferase alpha subunit repeat-containing protein 1-A.
    
 
 0.486
LOC106155614
F-box only protein 11 isoform X1.
   
 
 0.465
LOC106151911
Cullin-2; Belongs to the cullin family.
    
  0.434
LOC106171394
cullin-3-A; Belongs to the cullin family.
    
 0.429
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.