STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106168006Amyloid-like protein 2. (551 aa)    
Predicted Functional Partners:
LOC106171953
Sortilin-related receptor isoform X1.
    
 0.766
LOC112041756
Sortilin.
    
 0.766
LOC106176290
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.735
LOC106158046
Contactin-2-like.
   
 
 0.685
LOC106172977
Contactin.
   
 
 0.685
LOC106159168
DCC-interacting protein 13-alpha-like.
    
 
 0.672
LOC106163145
DCC-interacting protein 13-alpha-like.
    
 
 0.672
LOC106172791
DCC-interacting protein 13-alpha-like.
    
 
 0.672
LOC106151607
Amyloid-beta A4 precursor protein-binding family A member 1.
   
 
 0.661
LOC106151610
Protein lin-10-like.
   
 
 0.661
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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