STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106168882Receptor expression-enhancing protein. (270 aa)    
Predicted Functional Partners:
LOC106171707
Endoplasmic reticulum junction formation protein lunapark.
    
 
 0.634
LOC106158764
Double-stranded RNA-binding protein Staufen homolog 2.
      
 0.633
LOC106177465
TBC1 domain family member 14 isoform X1.
      
 0.632
LOC106157888
Atlastin-2.
    
 
 0.573
LOC106158857
Atlastin-2.
    
 
 0.573
LOC106179972
Seipin isoform X1.
      
 0.572
LOC106170608
Spatacsin isoform X1.
      
 0.516
LOC106173971
Polyphosphoinositide phosphatase-like.
      
 0.513
LOC106170207
Polyphosphoinositide phosphatase.
      
 0.513
LOC106150597
Src kinase-associated phosphoprotein 2 isoform X1.
      
 0.507
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.